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[pull] main from NOAA-GFDL:main #114

Merged
merged 178 commits into from
Jun 4, 2024
Merged

[pull] main from NOAA-GFDL:main #114

merged 178 commits into from
Jun 4, 2024

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@pull pull bot commented Apr 18, 2024 •
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@pull pull bot requested a review from rem1776 as a code owner April 18, 2024 20:21
@pull pull bot added the ⤵️ pull label Apr 18, 2024
rem1776 and others added 22 commits April 30, 2024 09:23
@rem1776
CI: update workflow containers and fully migrate to github container …
ac22da2 
…registry (#1453)
@rem1776
chore: Update CONTRIBUTING.md with section for code reviews (#1495)
e429ebd
@rem1776
fix: autotools hdf5 compiler check (#1493)
648cbcf
@thomas-robinson
feat: first attempt at adding the fms_diag_object to diag manager
a9a6165
@thomas-robinson
feat: Second attempt at adding the fms_diag_object to diag manager
26b92b2
@thomas-robinson
feat: Adds diag_object to diag_manager folder and compiles.
bef210d
@thomas-robinson
feat: Adds modern diag namelist variable
2b5faa6
@thomas-robinson
feat: setup diag_yaml_object and remove object overrides
42a0c6b
@thomas-robinson
feat: Adds all variables to diag object that are registered.
2b2d70c
@thomas-robinson
fix: setup register routines in diag_object
b7c350d
@thomas-robinson
fix: typos in filling in missing value for diag object registration.
252ef7c
@thomas-robinson
feat: Initial add of fms_diag_yaml_object.F90
525b7e3
@thomas-robinson
fix: compile errors in new diag manager related to objects
b215a38
@thomas-robinson
feat: updates getter functions in the diag yaml objects
c907b66
@uramirez8707
feat: add diag_yaml object (#866)
0f3db8b
@ngs333
feat: Add the fms_diag_object container. (#867)
1edbc32
@thomas-robinson
fix: Changes fms_diag_object to fmsDiagObject_type (#879)
2736b35
@uramirez8707
test: Dm update diag_yaml_object_init() tests (#883)
93ef8e8
@thomas-robinson
feat: add getter functions to fms_diag_object (#885)
b349abf
@ngs333
fix: diag_manager container and linked list updates and add test (#888)
f1c8961
@uramirez8707
feat: Moves fms_diag_yaml_obj to fms_diag_yaml and updates test (#887)
fd32093
@uramirez8707
fix: diag_yaml object fix frequency and reading reductions (#901)
4175073
uramirez8707 and others added 28 commits May 1, 2024 17:46
@uramirez8707
fix: modern diag manager input buffer (#1468)
2cae720
@uramirez8707
fix: Modern_diag_manager multiple_send_data calls option (#1478)
d7314d6
@uramirez8707
fix: diag_manager hack for when starting with 2/29 and outputting yea…
0d0c8ac 
…rly data (#1479)
@uramirez8707
Fix: Modern diag manager. Catch missing_values without masks (#1481)
a13eb33
@rem1776
Fix: dmUpdate nvhpc compile error (#1473)
b1186aa
@uramirez8707
docs: update diag manager readme and add markdown for yaml format (#…
fab3204 
…1483)
@uramirez8707
fix: modern_diag_manager empty files and non registered fields (#1482)
41f5915
@rem1776
fix: diag_manager uninitialized return value (#1484)
8d1bef6
@rem1776
fix: modern diag fixes for gcc (#1486)
4b5cd16
@uramirez8707
fix: diag manager keep track of time and unlimited dimension at the f…
7a13581 
…ile and buffer level (#1487)
@rem1776
feat: diag manager output yaml routine (#1080)
d8bf2db
chore: delete docs_uml directory and bring over any diffs
65b16d5
@rem1776
Merge branch 'NOAA-GFDL:main' into dmupdate-rebase-pt101
4faa9a8
fix: missed changes for test_diag_yaml
980cb54
Merge branch 'dmupdate-rebase-pt101' of github.com:rem1776/FMS into d…
00f8e36 
…mupdate-rebase-pt101
@rem1776
feat: Merge dmUpdate branch into main (#1505)
b67a685
@rem1776
chore: 2024.01 changelog and version updates (#1507)
87344ee
@github-actions
chore: append dev to version number after release (#1509)
d42f8ac
@uramirez8707
fix: Modern_diag_manager 0 days frequencies and mix_snapshot_average_…
c422d44 
…fields deprecation (#1500)
@uramirez8707
fix: modern diag manager allocation failures when using two empty fil…
03a9c74 
…es (#1503)
@rem1776
fix: remove unused legacy function from test_mpp_gatscat.F90 (#1510)
0368711
@uramirez8707
fix: modern diag manager correctly use the weight argument from send_…
e2fa28a 
…data (#1513)
@alex-huth
fix: use mpp_gather to improve iceberg restart read times (#1460)
42f8506
@uramirez8707
fix: modern diag manager time_bnds issue when running for 1 day and r…
6933c96 
…unning daily data (#1523)
@uramirez8707
fix: implement flush_nc_files in the new diag manager and adds a test (…
98e2ebd 
…#1506)
@uramirez8707
fix: modern diag allow mixing static and non-static fields when the f…
c00367f 
…req is 0 days (#1525)
@rem1776
chore: 2024.01.01 release updates (#1535)
460c592
@github-actions
chore: append -dev to version number (#1536)
5757c78
@rem1776 rem1776 merged commit 5757c78 into rem1776:main Jun 4, 2024
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10 participants
@rem1776 @menzel-gfdl @Scitech777 @dkokron @thomas-robinson @uramirez8707 @ngs333 @ganganoaa @mcallic2 @alex-huth